Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015802646.1_cds_XP_016480356.1_7139
CDS Infomation

[gene=LOC107801524] [db_xref=GeneID:107801524] [protein=reticulon-like protein B21] [protein_id=XP_016480356.1] [location=complement(join(19054..19217,19554..19676,19920..19985,20862..20931,21054..21201,21427..21501,21610..21712,22324..22374,22468..23494))] [gbkey=CDS]
Sequence

ATGGAAGTTGGCAATAGAAGAAAGAGCACATCATCAAGAAATAATGGTAGTGTTGTGGCC
TCAGGTTCTGTTTGGGAAAATAGAATGAAACTTGATGAAGTAAAAGGTGGAATCAAAGTA
CTCATTAGTAACAATATTGAAGAAACCCCAGATGAAAATGATGATAAAGATTGCACCTTT
ACTAATGGAAACAACAATCAAGTGGATAAAAAGTTAGAAATGGGGCCAAAAAAATCAAAT
CTTGGTGTTGTTGGGGTTATGAGTGGGAAGAGAAAAACTTGGAAAGCTGAAAATTTTGAA
GGAAACCCAATTCAGATTGCTAGTAAAAGAACTGATTTGAGCAAAAAATTGGATGAAAAG
TGTCAAGATTTGAGTAAAAAATTGGATGAAAAGTGTCAAGATTTGAGTAAAATCCCAATT
CGGAGCAAGAAAAAGTCTGAGTCTGTTAATGGGAAAGCAAAATTAGTATCAAGTAAGGAA
TTTGATGAGGAAAGCAAGAATCTTGATTCAAAAATCTTGAAAAAATCCAATCTTGAGGAG
TCAAGTAAGAATATTGAAGGATCAATTAAGGAAAATGAGAAGAAACCATTAATTGGGATA
AAGAAGACAAAATCTGAGGAAAATTGTGAAGAAAAATTCATCACAAGCAATGTGGTGAAT
TTGACTTATGACGAGGAGGTTTCGTCGGCTATTTTGGACAGGCAGGTTCGGAAGTTAAGG
TCGAGGGAGATAACTTCTGAGGCCAAATTTGCAACTAAAGTAGATAAGAATCTTGAAAAT
GAAGAGGAAGAAGAAGAATGGGATGAGGTATTAGAGGAAGAAATTGATGAGGAAATTGAA
AAGAAAAGTGTTGATGTTAAAGAAATTAGAGTACAAGAACAGAAACCTAAAAAGATTGTG
ATTGAAGAGAAGAAACTTCAGTATAATAATAAAAGACAAATACCAATTTCTTCAATTAAT
AGGAAACAGCTCCCTCCTACTTCAATTCATGCCAAAATTCATCCAAGTCCAACAAGAACC
AAATCAGTTCCAGTTTCAGATGTAAATCCTAGACAAAATGGCAAATTACAAAGCTTTGTT
GATTTAGTGATGTGGAGAAATGTATCAAAATCTACATTAGTCTTTGGAATTGGAACCTTT
GTTATTATTTCATCTTCATATACTCAAGATCTTAATATCAGCTTCATTGCTGTGCTTTCC
TACTTAGGTCTGGTCTATCTTGCTGCAATCTTTCTCTTTAGATCGCTCATTCACAGGAGA
GCGAATGATATTGGTGAATCAAGCGAGTATATAGTAGGGGAAGAAGAAGCAGTGTGGGCA
CTGAAGTTGATACTTCCTTTCATAAATGAGTTTCTTTTGAAAATCAGAGCCCTTTTTTCC
GGTGATCCTGCAACTACAATGAAGATGGCAGTTCTGCTGTTTCTTTTGGCTCGGTATGGC
AGCTCCATAACCATTTGGAAACTGTCCAAATTGGGCTTTTTTGGAGTTATGGTCATACCA
AAAACTTGCTCTTCTTATTCCACACAGTTAACCTCTTATGGTACATTTTTGATAAGATAC
ATTAGAGATGCTTGGGAATCTTGTACTCACAAAAAAGCTGTTGGATTTGCAATCTTCACA
ATAGTTTGGAATTTCTCTTCAATCATTGCCAGAACATGGGCAGTGTTCATGTTATATGTG
GGAATTAGATACTATCAACAAAACTTGATGACAGAGGACATTACTATAAAAGCTGATGAT
TCTTGGCAAGGAAAAATTAGAGAACAGAGACAAGTTGGGAGAAAGTCCAGTTTAATGGAA
ACAAGAAAACAAAAGAAAGCATTTTAA

Peptide Sequence

PEP ID

XP_016480356.1
PEP Infomation

PREDICTED: reticulon-like protein B21 [Nicotiana tabacum]
Sequence

MEVGNRRKSTSSRNNGSVVASGSVWENRMKLDEVKGGIKVLISNNIEETPDENDDKDCTF
TNGNNNQVDKKLEMGPKKSNLGVVGVMSGKRKTWKAENFEGNPIQIASKRTDLSKKLDEK
CQDLSKKLDEKCQDLSKIPIRSKKKSESVNGKAKLVSSKEFDEESKNLDSKILKKSNLEE
SSKNIEGSIKENEKKPLIGIKKTKSEENCEEKFITSNVVNLTYDEEVSSAILDRQVRKLR
SREITSEAKFATKVDKNLENEEEEEEWDEVLEEEIDEEIEKKSVDVKEIRVQEQKPKKIV
IEEKKLQYNNKRQIPISSINRKQLPPTSIHAKIHPSPTRTKSVPVSDVNPRQNGKLQSFV
DLVMWRNVSKSTLVFGIGTFVIISSSYTQDLNISFIAVLSYLGLVYLAAIFLFRSLIHRR
ANDIGESSEYIVGEEEAVWALKLILPFINEFLLKIRALFSGDPATTMKMAVLLFLLARYG
SSITIWKLSKLGFFGVMVIPKTCSSYSTQLTSYGTFLIRYIRDAWESCTHKKAVGFAIFT
IVWNFSSIIARTWAVFMLYVGIRYYQQNLMTEDITIKADDSWQGKIREQRQVGRKSSLME
TRKQKKAF

Transcript Sequence

Gene sequence data has not been registered.